2J1D | pdb_00002j1d

Crystallization of hDaam1 C-terminal Fragment

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1		6.2		pH 6.20

Crystal Properties
Matthews coefficient	Solvent content
4.19	70.42

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 100.897	α = 90
b = 100.343	β = 90
c = 148.397	γ = 90

Symmetry
Space Group	I 2 2 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC CCD		2006-02-12	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 24-ID-C		APS	24-ID-C

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.55	20	98	0.07	6.1	4.4		24546		2

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	OTHER	THROUGHOUT	2.25	19.83	23499	1500	100	0.22	0.218	0.26	0.25	0.27	RANDOM	57.76

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-6.26			11.9		-5.63

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	40.353
r_dihedral_angle_3_deg	18.891
r_dihedral_angle_4_deg	13.428
r_dihedral_angle_1_deg	6.215
r_scangle_it	2.017
r_scbond_it	1.398
r_angle_refined_deg	1.307
r_angle_other_deg	0.901
r_mcbond_it	0.892
r_mcangle_it	0.824
r_symmetry_hbond_refined	0.552
r_symmetry_vdw_refined	0.209
r_symmetry_vdw_other	0.205
r_nbd_refined	0.197
r_xyhbond_nbd_refined	0.189
r_nbd_other	0.188
r_nbtor_refined	0.174
r_nbtor_other	0.089
r_chiral_restr	0.074
r_mcbond_other	0.057
r_bond_refined_d	0.009
r_bond_other_d	0.006
r_gen_planes_refined	0.003
r_gen_planes_other	0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3202
Nucleic Acid Atoms
Solvent Atoms	75
Heterogen Atoms	11

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XDS	data scaling