2HFI

Solution NMR Structure of Protein yppE from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR213

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESY	Buffer: MC2023 -- 50mM Arginine, 10mM DTT, 50mM Bis Tris pH 6.5, 95% H2O, 5% D2O	95% H2O/5% D2O		6.5	ambient	298
2	GFT (4,3)D HNNCABCA	Buffer: MC2023 -- 50mM Arginine, 10mM DTT, 50mM Bis Tris pH 6.5, 95% H2O, 5% D2O	95% H2O/5% D2O		6.5	ambient	298
3	GFT (4,3)D CABCA(CO)NHN	Buffer: MC2023 -- 50mM Arginine, 10mM DTT, 50mM Bis Tris pH 6.5, 95% H2O, 5% D2O	95% H2O/5% D2O		6.5	ambient	298
4	GFT (4,3) HCCH	Buffer: MC2023 -- 50mM Arginine, 10mM DTT, 50mM Bis Tris pH 6.5, 95% H2O, 5% D2O	95% H2O/5% D2O		6.5	ambient	298
5	HNCACB	Buffer: MC2023 -- 50mM Arginine, 10mM DTT, 50mM Bis Tris pH 6.5, 95% H2O, 5% D2O	95% H2O/5% D2O		6.5	ambient	298
6	HABcoNH	Buffer: MC2023 -- 50mM Arginine, 10mM DTT, 50mM Bis Tris pH 6.5, 95% H2O, 5% D2O	95% H2O/5% D2O		6.5	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	750
2	Varian	INOVA	600
3	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
simulated annealing, molecular dynamics, torsion angle dynamics		VNMR

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (fewest violations)

Additional NMR Experimental Information
Details	The protein start to form dimer at NMR concentration

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VNMR	c	VARIAN
2	processing	NMRPipe	2.3	Delaglio, F.
3	data analysis	XEASY	1.3.1.3	BARTELS, C.
4	structure solution	CYANA	2.1	GUNTERT,P.
5	data analysis	AutoStructure	2.0	HUANG, Y.J.
6	refinement	CNS	1.1	Brunger, A.T.