2H9Z
Solution structure of hypothetical protein, HP0495 from Helicobacter pylori
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1.2mM hp0495, U-15N, 13C; 50mM phosphate buffer NA, 150mM Sodium chloride, 1mM EDTA, 1mM BMD; 90% H2O, 10% D2O | 90% H2O/10% D2O | 150mM salt | 6.0 | ambient | 308 | |
2 | 2D TOCSY | 1.2mM hp0495, U-15N, 13C; 50mM phosphate buffer NA, 150mM Sodium chloride, 1mM EDTA, 1mM BMD; 90% H2O, 10% D2O | 90% H2O/10% D2O | 150mM salt | 6.0 | ambient | 308 | |
3 | 3D_13C-separated_NOESY | 1.2mM hp0495, U-15N, 13C; 50mM phosphate buffer NA, 150mM Sodium chloride, 1mM EDTA, 1mM BMD; 90% H2O, 10% D2O | 90% H2O/10% D2O | 150mM salt | 6.0 | ambient | 308 | |
4 | 3D_15N-separated_NOESY | 1.2mM hp0495, U-15N, 13C; 50mM phosphate buffer NA, 150mM Sodium chloride, 1mM EDTA, 1mM BMD; 90% H2O, 10% D2O | 90% H2O/10% D2O | 150mM salt | 6.0 | ambient | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CNS | 1.1 | Brunger |
2 | refinement | CNS | 1.1 |