2FUU

NMR solution structure of the PHD domain from the human BPTF in complex with H3(1-15)K4me3 peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY0.64 mM PHD finger U-15N,13C; 3.0 mM H3(1-15)K4me3; 20 mM Phosphate buffer pH 7.5, 50 mM KCl, 5 mM DTT90% H2O/10% D2O50 mM KCl7.51 atm298
23D_15N-separated_NOESY0.62 mM PHD finger U-15N, 3.0 mM H3(1-15)K4me3; 20 mM Phosphate buffer pH 7.5, 50 mM KCl, 5 mM DTT90% H2O/10% D2O50 mM KCl7.51 atm298
33D filter-edit 15N-separated NOESY0.62 mM PHD finger U-15N, 3.0 mM H3(1-15)K4me3; 20 mM Phosphate buffer pH 7.5, 50 mM KCl, 5 mM DTT90% H2O/10% D2O50 mM KCl7.51 atm298
43D filter-edit 13C-separated NOESY0.64 mM PHD finger U-15N,13C; 3.0 mM H3(1-15)K4me3; 20 mM Phosphate buffer pH 7.5, 50 mM KCl, 5 mM DTT90% H2O/10% D2O50 mM KCl7.51 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITYPLUS600
2BrukerAVANCE800
3BrukerAVANCE900
NMR Refinement
MethodDetailsSoftware
The structure was solved using a torsion angle simulated annealing protocolTopSpin
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number85
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsThe structure was determined using various triple-resonance NMR experiments plus filter edit experiments to determine the structure of the peptide.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin1.5Bruker
2collectionVNMR1.6cVarian
3data analysisCARA1.5.3Rochus Keller
4structure solutionX-PLOR2.13G. Marius Clore
5processingNMRPipeF. Delaglio
6refinementX-PLOR2.13G. Marius Clore