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Crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus solfataricus p2 at 2.00 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION,SITTING DROP,NANODROP 9.5 277 20.0% PEG-8000, 0.1M CHES, pH 9.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.41 48.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.36 α = 90 b = 108.35 β = 100.31 c = 70.57 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD Adjustable focusing mirrors in K-B geometry 2005-10-31 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 0.95372, 0.979996 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 69.5 91.6 0.067 9.53 3.2 53921
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 79.6 79.6 0.424 2.05
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 69.5 51161 2733 97.51 0.177 0.17656 0.174 0.1815 0.226 0.2269 RANDOM 36.569
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.3 -0.71 1.17 0.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.827 r_dihedral_angle_4_deg 17.074 r_dihedral_angle_3_deg 14.787 r_scangle_it 6.568 r_dihedral_angle_1_deg 5.772 r_scbond_it 4.934 r_mcangle_it 2.923 r_mcbond_it 1.961 r_angle_refined_deg 1.425 r_angle_other_deg 0.818
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.827 r_dihedral_angle_4_deg 17.074 r_dihedral_angle_3_deg 14.787 r_scangle_it 6.568 r_dihedral_angle_1_deg 5.772 r_scbond_it 4.934 r_mcangle_it 2.923 r_mcbond_it 1.961 r_angle_refined_deg 1.425 r_angle_other_deg 0.818 r_mcbond_other 0.485 r_symmetry_vdw_other 0.218 r_nbd_refined 0.214 r_nbtor_refined 0.185 r_nbd_other 0.176 r_xyhbond_nbd_refined 0.163 r_symmetry_hbond_refined 0.12 r_symmetry_vdw_refined 0.119 r_chiral_restr 0.082 r_nbtor_other 0.082 r_xyhbond_nbd_other 0.018 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5688 Nucleic Acid Atoms Solvent Atoms 347 Heterogen Atoms 84
Software Software Software Name Purpose REFMAC refinement XSCALE data scaling PDB_EXTRACT data extraction XDS data reduction SHELX phasing SHARP phasing