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Epstein Barr Virus dUTPase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 100 MM TRIS/HCL PH 8.5, 20% PEG 3350, 200 MM LISO4
Crystal Properties Matthews coefficient Solvent content 1.86 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.655 α = 90 b = 55.787 β = 90 c = 81.053 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2004-04-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 40 98.1 0.06 9.6 4.5 38985 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.54 95.4 0.27 2.9 4.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.5 46.47 38985 2088 98.1 0.15 0.148 0.187 0.2116 RANDOM 14.77
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.13 -0.4 0.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.575 r_dihedral_angle_4_deg 20.214 r_dihedral_angle_3_deg 16.391 r_dihedral_angle_1_deg 5.982 r_scangle_it 3.667 r_angle_other_deg 3.318 r_scbond_it 2.75 r_mcangle_it 2.295 r_mcbond_it 1.884 r_angle_refined_deg 1.848
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.575 r_dihedral_angle_4_deg 20.214 r_dihedral_angle_3_deg 16.391 r_dihedral_angle_1_deg 5.982 r_scangle_it 3.667 r_angle_other_deg 3.318 r_scbond_it 2.75 r_mcangle_it 2.295 r_mcbond_it 1.884 r_angle_refined_deg 1.848 r_mcbond_other 0.645 r_symmetry_vdw_other 0.218 r_nbd_other 0.206 r_nbd_refined 0.203 r_chiral_restr 0.194 r_symmetry_hbond_refined 0.192 r_symmetry_vdw_refined 0.189 r_xyhbond_nbd_refined 0.182 r_nbtor_refined 0.179 r_nbtor_other 0.095 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1974 Nucleic Acid Atoms Solvent Atoms 305 Heterogen Atoms 40
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling SOLVE phasing