☰ Navigation Tabs
Crystal structure of CLA-producing fatty acid isomerase from P. acnes
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 283 5% PEG 400, 0.02M HEPES, 0.1M magnesium sulphate, 2.2M ammonium sulphate, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 283K
Crystal Properties Matthews coefficient Solvent content 2.69 54.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 133.707 α = 90 b = 60.759 β = 115.85 c = 72.158 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 50 100 37527 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2.02 98.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.95 46.37 34437 1865 95.18 0.21495 0.21256 0.2216 0.25908 0.2672 RANDOM 21.631
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.62 0.65 -0.05 1.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.442 r_dihedral_angle_4_deg 18.318 r_dihedral_angle_3_deg 13.824 r_dihedral_angle_1_deg 6.396 r_scangle_it 1.906 r_scbond_it 1.238 r_angle_refined_deg 1.228 r_angle_other_deg 0.863 r_mcangle_it 0.687 r_mcbond_it 0.389
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.442 r_dihedral_angle_4_deg 18.318 r_dihedral_angle_3_deg 13.824 r_dihedral_angle_1_deg 6.396 r_scangle_it 1.906 r_scbond_it 1.238 r_angle_refined_deg 1.228 r_angle_other_deg 0.863 r_mcangle_it 0.687 r_mcbond_it 0.389 r_symmetry_vdw_other 0.265 r_symmetry_hbond_refined 0.223 r_nbd_refined 0.21 r_nbd_other 0.203 r_nbtor_refined 0.182 r_metal_ion_refined 0.176 r_xyhbond_nbd_refined 0.164 r_symmetry_vdw_refined 0.138 r_mcbond_other 0.089 r_nbtor_other 0.08 r_chiral_restr 0.07 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3447 Nucleic Acid Atoms Solvent Atoms 432 Heterogen Atoms 92
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling MOLREP phasing