2A2Y

NMR Structue of Sso10b2 from Sulfolobus solfataricus


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1 mM Sso10b2, U-15N, U-13C, pH 4.8, 90% H2O, 10% D2O90% H2O/10% D2O04.81 atm303
23D_13C-separated_NOESY1 mM Sso10b2, U-15N, U-13C, pH 4.899.996% D2O04.81 atm303
3HNHA1 mM Sso10b2, U-15N, U-13C, pH 4.8, 90% H2O, 10% D2O90% H2O/10% D2O04.81 atm303
4T1_T1rho_HSQC1 mM Sso10b2, U-15N, pH 4.8, 90% H2O, 10% D2O90% H2O/10% D2O04.81 atm303
52D_1H-15N_NOE1 mM Sso10b2, U-15N, pH 4.8, 90% H2O, 10% D2O90% H2O/10% D2O04.81 atm303
612C-filtered_C13-edited_NOESYhetero-labeled dimer consisting of 0.5 mM Sso10b2 U-15N, U-13C, 0.5 mM Sso10b2 unlabled pH 5.099.996% D2O04.81 atm303
7IPAP_HSQC1 mM Sso10b2, U-15N, pH 4.8, 90% H2O, 10% D2O with alignment media consisting of 5% C12E5/hexanol (r=.87)90% H2O, 10%D2O with alignment media consisting of 5% C12E5/hexanol (r=.87)04.81 atm303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITYPLUS800
2VarianUNITYPLUS500
NMR Refinement
MethodDetailsSoftware
Simulated annealing using cartesian and torsion angle dynamics.NOE assignments, distance restraint calibrations, and initial structures were made using ARIA 1.2. Final structure refinement was done using Xplor-NIH with the NOE derived distance restraints, 126 phi/psi dihedral angles, 48 HNHA coupling constants, 33 hydrogen bonds, 80 dipolar couplings, 57 T1/T2 relaxation ratios, and non-crystallographic dimer symmetry restraints (numbers are per monomer). Anisotropy tensors were refined simultaneously with the structure.VNMR
NMR Ensemble Information
Conformer Selection Criteria10 structures with the lowest total energy including restraint terms
Conformers Calculated Total Number100
Conformers Submitted Total Number11
Representative Model1 (model 1 is a restrained energy minimized average structure. models 2 through 11 are the 10 best ensemble structures.)
Additional NMR Experimental Information
Detailsmodel 1 is an energy minimized average structure. models 2 through 11 are the 10 best ensemble structures.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1CVarian, Inc.
2processingNMRPipe2004F. Delaglio
3data analysisNMRView5.2.2B. Johnson
4structure solutionARIA1.2M. Nilges
5data analysisTENSOR22M. Blackledge
6refinementXplor-NIH2.9.7G.M. Clore