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carboxysome shell protein ccmK4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.7 293 25% ethylene glycol, 20 mM Tris, 100mM NaCl, 10 mM EDTA, 5mM DTT, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.73 54.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.758 α = 90 b = 87 β = 90 c = 96.512 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2003-07-14 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.9795,0.979,0.9718 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 98.22 99.4 0.083 25 12.5 66043 66043 40.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 100 0.428 6529
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.803 64.55 61952 61952 3340 98.22 0.19436 0.19436 0.1926 0.2035 0.22708 0.2321 RANDOM 23.132
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.06 -0.62 0.68
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.405 r_dihedral_angle_4_deg 20.154 r_dihedral_angle_3_deg 14.458 r_dihedral_angle_1_deg 5.374 r_scangle_it 2.778 r_scbond_it 1.731 r_angle_refined_deg 1.241 r_angle_other_deg 1.146 r_mcangle_it 0.961 r_mcbond_it 0.692
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.405 r_dihedral_angle_4_deg 20.154 r_dihedral_angle_3_deg 14.458 r_dihedral_angle_1_deg 5.374 r_scangle_it 2.778 r_scbond_it 1.731 r_angle_refined_deg 1.241 r_angle_other_deg 1.146 r_mcangle_it 0.961 r_mcbond_it 0.692 r_symmetry_vdw_other 0.291 r_nbd_refined 0.197 r_nbd_other 0.177 r_nbtor_refined 0.163 r_mcbond_other 0.162 r_symmetry_hbond_refined 0.141 r_xyhbond_nbd_refined 0.117 r_symmetry_vdw_refined 0.104 r_nbtor_other 0.084 r_chiral_restr 0.081 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4632 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms
Software Software Software Name Purpose Blu-Ice data collection SCALEPACK data scaling MLPHARE phasing REFMAC refinement