X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.729325% ethylene glycol, 20 mM Tris, 100mM NaCl, 10 mM EDTA, 5mM DTT, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.7354.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 84.758α = 90
b = 87β = 90
c = 96.512γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152003-07-14MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.20.9795,0.979,0.9718ALS8.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.898.2299.40.0832512.5660436604340.8
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.861000.4286529

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.80364.556195261952334098.220.194360.194360.19260.22708RANDOM23.132
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.06-0.620.68
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.405
r_dihedral_angle_4_deg20.154
r_dihedral_angle_3_deg14.458
r_dihedral_angle_1_deg5.374
r_scangle_it2.778
r_scbond_it1.731
r_angle_refined_deg1.241
r_angle_other_deg1.146
r_mcangle_it0.961
r_mcbond_it0.692
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.405
r_dihedral_angle_4_deg20.154
r_dihedral_angle_3_deg14.458
r_dihedral_angle_1_deg5.374
r_scangle_it2.778
r_scbond_it1.731
r_angle_refined_deg1.241
r_angle_other_deg1.146
r_mcangle_it0.961
r_mcbond_it0.692
r_symmetry_vdw_other0.291
r_nbd_refined0.197
r_nbd_other0.177
r_nbtor_refined0.163
r_mcbond_other0.162
r_symmetry_hbond_refined0.141
r_xyhbond_nbd_refined0.117
r_symmetry_vdw_refined0.104
r_nbtor_other0.084
r_chiral_restr0.081
r_bond_refined_d0.011
r_gen_planes_refined0.004
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4632
Nucleic Acid Atoms
Solvent Atoms306
Heterogen Atoms

Software

Software
Software NamePurpose
Blu-Icedata collection
SCALEPACKdata scaling
MLPHAREphasing
REFMACrefinement