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Family 16 Cabohydrate Binding Domain Module 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 298 3M sodium formate, 15% ethylene glycol, pH7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 2.7 54.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.425 α = 90 b = 77.763 β = 90 c = 77.935 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2006-12-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 50 97.8 0.046 29.5 5.8 67647
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.4 1.45 87.7 0.408 2.9 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.4 20 64126 3425 97.68 0.17791 0.1769 0.1784 0.19674 0.1999 RANDOM 21.372
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.83 0.49 0.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.347 r_dihedral_angle_3_deg 10.787 r_dihedral_angle_1_deg 7.078 r_sphericity_free 3.706 r_sphericity_bonded 3.167 r_scangle_it 3.115 r_scbond_it 2.398 r_mcangle_it 1.708 r_rigid_bond_restr 1.637 r_angle_refined_deg 1.251
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.347 r_dihedral_angle_3_deg 10.787 r_dihedral_angle_1_deg 7.078 r_sphericity_free 3.706 r_sphericity_bonded 3.167 r_scangle_it 3.115 r_scbond_it 2.398 r_mcangle_it 1.708 r_rigid_bond_restr 1.637 r_angle_refined_deg 1.251 r_mcbond_it 1.084 r_nbtor_refined 0.307 r_symmetry_hbond_refined 0.239 r_nbd_refined 0.208 r_symmetry_vdw_refined 0.166 r_xyhbond_nbd_refined 0.156 r_chiral_restr 0.09 r_metal_ion_refined 0.088 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2290 Nucleic Acid Atoms Solvent Atoms 341 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement ADSC data collection HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing