2YXV | pdb_00002yxv

The deletion mutant of Multicopper Oxidase CueO

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION		293	16% PEG 3350, 0.16M Potassium Nitrate, 20% Glycerol, VAPOR DIFFUSION, temperature 293K

Crystal Properties
Matthews coefficient	Solvent content
2.05	39.94

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 49.982	α = 83.2
b = 50.947	β = 90.83
c = 86.05	γ = 66.66

Symmetry
Space Group	P 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	IMAGE PLATE	RIGAKU		2007-03-07	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	ROTATING ANODE	RIGAKU	1.5418

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.81	25.94					62169

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1.81	24.4	62169	3320	92.74	0.1724	0.17051	0.1852	0.20778	0.2197	RANDOM	23.84

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.07	-1.52	-0.02	2.11	-0.35	-0.75

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	35.756
r_dihedral_angle_4_deg	18.65
r_dihedral_angle_3_deg	12.658
r_dihedral_angle_1_deg	6.551
r_scangle_it	1.968
r_scbond_it	1.445
r_angle_refined_deg	1.384
r_angle_other_deg	0.773
r_mcangle_it	0.738
r_mcbond_it	0.643
r_symmetry_vdw_refined	0.23
r_symmetry_vdw_other	0.209
r_nbd_refined	0.194
r_nbd_other	0.18
r_nbtor_refined	0.171
r_mcbond_other	0.116
r_xyhbond_nbd_refined	0.105
r_chiral_restr	0.096
r_nbtor_other	0.082
r_symmetry_hbond_refined	0.069
r_metal_ion_refined	0.033
r_bond_refined_d	0.009
r_gen_planes_refined	0.004
r_bond_other_d	0.001
r_gen_planes_other	0.001
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6768
Nucleic Acid Atoms
Solvent Atoms	395
Heterogen Atoms	14

Software

Software
Software Name	Purpose
REFMAC	refinement