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Structure of the Ran-binding domain from human RanBP3 (E352A-R353V double mutant)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 1.5 M LI2SO4, 100 MM HEPES PH 7.5
Crystal Properties Matthews coefficient Solvent content 2.8 56.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.32 α = 90 b = 61.32 β = 90 c = 137.2 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD BENT CYLINDRICAL MIRROR M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.61 35 94.7 0.06 26.7 10.7 37445 3 17.69
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.61 1.7 81.1 0.53 4.3 9.2
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SIRAS NONE 1.61 34.654 1.37 37433 1862 94.74 0.149 0.1463 0.1433 0.1988 0.1428 26.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.3625 -0.3625 0.7249
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.526 f_angle_d 0.845 f_chiral_restr 0.062 f_bond_d 0.004 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1864 Nucleic Acid Atoms Solvent Atoms 290 Heterogen Atoms 15
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SHELXD phasing SHELXE phasing PHENIX refinement