X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
10.42-0.58 M NAH2PO4, 0.83-0.74 M K2HPO4
Crystal Properties
Matthews coefficientSolvent content
3.7467

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 76.638α = 90
b = 125.831β = 90
c = 211.688γ = 90
Symmetry
Space GroupI 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4r2007-04-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-3ESRFID14-3

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
122098.10.0813.546787922.5
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.0592.90.522.53.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTAFCHIA1 APOSTRUCTURE TO BE DEPOSITED219.86443534401000.217520.215850.24886RANDOM27.157
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
3.73-1.35-2.38
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.98
r_dihedral_angle_4_deg20.174
r_dihedral_angle_3_deg14.389
r_dihedral_angle_1_deg6.257
r_scangle_it3.301
r_scbond_it2.164
r_angle_refined_deg1.549
r_mcangle_it1.413
r_mcbond_it0.82
r_chiral_restr0.226
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.98
r_dihedral_angle_4_deg20.174
r_dihedral_angle_3_deg14.389
r_dihedral_angle_1_deg6.257
r_scangle_it3.301
r_scbond_it2.164
r_angle_refined_deg1.549
r_mcangle_it1.413
r_mcbond_it0.82
r_chiral_restr0.226
r_bond_refined_d0.018
r_gen_planes_refined0.008
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4805
Nucleic Acid Atoms
Solvent Atoms371
Heterogen Atoms106

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling