2XMT

Copper chaperone Atx1 from Synechocystis PCC6803 (Cu1 form)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.528%(W/V) PEG 8000, 200MM SODIUM ACETATE, 100MM SODIUM CACODYLATE PH 7.5
Crystal Properties
Matthews coefficientSolvent content
2.1242.11

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 29.09α = 100.89
b = 29.66β = 92.58
c = 38.43γ = 117.91
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCDMIRRORS2008-07-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID29ESRFID29

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.52590.30.0518.23.815929
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.5888.10.373.93.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2XMJ1.5251509280790.150.162560.160410.20279RANDOM12.342
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.220.350.050.350.01-0.24
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg47.334
r_dihedral_angle_3_deg11.602
r_sphericity_free6.873
r_dihedral_angle_1_deg5.737
r_scangle_it5.431
r_sphericity_bonded3.962
r_scbond_it3.794
r_dihedral_angle_4_deg2.81
r_mcangle_it2.438
r_rigid_bond_restr1.976
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg47.334
r_dihedral_angle_3_deg11.602
r_sphericity_free6.873
r_dihedral_angle_1_deg5.737
r_scangle_it5.431
r_sphericity_bonded3.962
r_scbond_it3.794
r_dihedral_angle_4_deg2.81
r_mcangle_it2.438
r_rigid_bond_restr1.976
r_mcbond_it1.619
r_angle_refined_deg1.494
r_angle_other_deg0.951
r_mcbond_other0.758
r_chiral_restr0.087
r_bond_refined_d0.016
r_gen_planes_refined0.007
r_gen_planes_other0.002
r_bond_other_d0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms885
Nucleic Acid Atoms
Solvent Atoms132
Heterogen Atoms2

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing