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X-RAY STRUCTURE OF CYP51 FROM THE HUMAN PATHOGEN TRYPANOSOMA CRUZI IN COMPLEX WITH FLUCONAZOLE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2WUZ PDB ENTRY 2WUZ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 25% PEG 4000, 0.1 M BIS-TRIS, PH 5.5
Crystal Properties Matthews coefficient Solvent content 2.3 47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 69.993 α = 90 b = 101.472 β = 111.63 c = 74.729 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD ADSC CCD MIRRORS 2009-10-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.27 24.3 100 0.09 8.5 3.6 40051 31.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.27 2.39 55.7 0.42 2.4 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2WUZ 2.27 69.5 38067 1944 89.1 0.19677 0.19277 0.1891 0.27339 0.267 RANDOM 23.751
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.17 0.91 -0.05 0.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.902 r_dihedral_angle_3_deg 18.953 r_dihedral_angle_4_deg 18.536 r_sphericity_free 6.576 r_dihedral_angle_1_deg 6.51 r_scangle_it 3.56 r_scbond_it 2.326 r_sphericity_bonded 2.308 r_angle_refined_deg 1.736 r_rigid_bond_restr 1.483
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.902 r_dihedral_angle_3_deg 18.953 r_dihedral_angle_4_deg 18.536 r_sphericity_free 6.576 r_dihedral_angle_1_deg 6.51 r_scangle_it 3.56 r_scbond_it 2.326 r_sphericity_bonded 2.308 r_angle_refined_deg 1.736 r_rigid_bond_restr 1.483 r_mcangle_it 1.463 r_mcbond_it 0.851 r_chiral_restr 0.117 r_bond_refined_d 0.016 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6943 Nucleic Acid Atoms Solvent Atoms 429 Heterogen Atoms 130
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling REFMAC phasing