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Aged Form of Human Butyrylcholinesterase Inhibited by Tabun Analogue TA4
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1P0I PDB ENTRY 1P0I
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 0.1 M MES BUFFER PH 6.5, 2.1M AMMONIUM SULFATE
Crystal Properties Matthews coefficient Solvent content 2.8 55.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 154.86 α = 90 b = 154.86 β = 90 c = 126.01 γ = 90
Symmetry Space Group I 4 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 CCD ADSC CCD 2008-04-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 99.8 0.09 22.8 7.3 51418 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 99.8 0.375 4.35 7.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1P0I 2 48.87 49870 1543 100 0.18536 0.18431 0.184 0.21957 0.2186 RANDOM 27.899
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.223 r_dihedral_angle_4_deg 16.084 r_dihedral_angle_3_deg 15.542 r_dihedral_angle_1_deg 6.209 r_scangle_it 2.916 r_scbond_it 1.786 r_angle_refined_deg 1.351 r_mcangle_it 1.278 r_mcbond_it 0.691 r_chiral_restr 0.101
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.223 r_dihedral_angle_4_deg 16.084 r_dihedral_angle_3_deg 15.542 r_dihedral_angle_1_deg 6.209 r_scangle_it 2.916 r_scbond_it 1.786 r_angle_refined_deg 1.351 r_mcangle_it 1.278 r_mcbond_it 0.691 r_chiral_restr 0.101 r_bond_refined_d 0.011 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4204 Nucleic Acid Atoms Solvent Atoms 397 Heterogen Atoms 156
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling XDS phasing