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Human c-Met Kinase in complex with azaindole inhibitor
Crystallization Crystal Properties Matthews coefficient Solvent content 1.98 39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.411 α = 90 b = 42.312 β = 93.01 c = 84.826 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2008-02-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 42.37 99.1 0.13 12.43 4 18000 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 99.4 0.49 4.22 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 42.37 17224 774 100 0.212 0.21 0.2173 0.265 0.2699 RANDOM 20.436
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.675 r_dihedral_angle_4_deg 15.695 r_dihedral_angle_3_deg 14.111 r_dihedral_angle_1_deg 5.925 r_scangle_it 5.064 r_scbond_it 4.079 r_mcangle_it 2.897 r_mcbond_it 2.399 r_angle_refined_deg 1.148 r_angle_other_deg 0.779
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.675 r_dihedral_angle_4_deg 15.695 r_dihedral_angle_3_deg 14.111 r_dihedral_angle_1_deg 5.925 r_scangle_it 5.064 r_scbond_it 4.079 r_mcangle_it 2.897 r_mcbond_it 2.399 r_angle_refined_deg 1.148 r_angle_other_deg 0.779 r_mcbond_other 0.54 r_symmetry_vdw_other 0.22 r_nbd_refined 0.197 r_nbd_other 0.179 r_nbtor_refined 0.177 r_xyhbond_nbd_refined 0.167 r_symmetry_vdw_refined 0.157 r_symmetry_hbond_refined 0.129 r_nbtor_other 0.083 r_chiral_restr 0.069 r_bond_refined_d 0.009 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2303 Nucleic Acid Atoms Solvent Atoms 71 Heterogen Atoms 36
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling CCP4 phasing