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Human Nek2 kinase ADP-bound
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 50 MM TRIS, PH 8.5 2-10% PEG8000
Crystal Properties Matthews coefficient Solvent content 2.55 57.04
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.467 α = 90 b = 57.103 β = 132.99 c = 80.213 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 26.23 95.6 0.05 15.8 3.6 45663 3 14.14
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION OTHER 1.55 24.74 0.02 43905 2241 91.9 0.173 0.172 0.19 0.2018 25.23
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.7541 -3.968 -2.5531 4.3073
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 17.264 f_angle_d 0.977 f_chiral_restr 0.066 f_bond_d 0.004 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2175 Nucleic Acid Atoms Solvent Atoms 355 Heterogen Atoms 44
Software Software Software Name Purpose PHENIX refinement