2W1E

Structure determination of Aurora Kinase in complex with inhibitor


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.856.3

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 83.086α = 90
b = 83.086β = 90
c = 168.133γ = 120
Symmetry
Space GroupP 61 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCDMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-4ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.9320.7999.60.055.83.974642

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUTNONE2.9320.79746439099.70.2370.2330.302RANDOM76.64
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.7-0.35-0.71.05
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.272
r_dihedral_angle_4_deg20.094
r_dihedral_angle_3_deg19.117
r_dihedral_angle_1_deg6.543
r_scangle_it4.289
r_mcangle_it3.655
r_scbond_it2.644
r_mcbond_it2.125
r_angle_other_deg1.683
r_angle_refined_deg1.437
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.272
r_dihedral_angle_4_deg20.094
r_dihedral_angle_3_deg19.117
r_dihedral_angle_1_deg6.543
r_scangle_it4.289
r_mcangle_it3.655
r_scbond_it2.644
r_mcbond_it2.125
r_angle_other_deg1.683
r_angle_refined_deg1.437
r_chiral_restr0.069
r_bond_refined_d0.012
r_gen_planes_refined0.005
r_bond_other_d0.003
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2070
Nucleic Acid Atoms
Solvent Atoms4
Heterogen Atoms31

Software

Software
Software NamePurpose
REFMACrefinement