X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.51.25M AMMONIUM SULFATE, 90MM SODIUM CITRATE, 10% 4-METHYL PENTANEDIOL, PH 5.5
Crystal Properties
Matthews coefficientSolvent content
2.141.9

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 26.766α = 90
b = 56.577β = 95.17
c = 45.308γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCDMIRRORS2005-06-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID29ESRFID29

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.3945.1395.30.0752.224835
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.381.4275.30.482.51.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1FF41.3945.1324835130995.30.20.1990.212RANDOM13.26
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.130.17-0.70.6
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.85
r_dihedral_angle_3_deg13.341
r_dihedral_angle_4_deg10.844
r_dihedral_angle_1_deg7.076
r_scangle_it3.971
r_scbond_it2.919
r_mcangle_it1.822
r_angle_refined_deg1.62
r_mcbond_it1.038
r_angle_other_deg0.994
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.85
r_dihedral_angle_3_deg13.341
r_dihedral_angle_4_deg10.844
r_dihedral_angle_1_deg7.076
r_scangle_it3.971
r_scbond_it2.919
r_mcangle_it1.822
r_angle_refined_deg1.62
r_mcbond_it1.038
r_angle_other_deg0.994
r_symmetry_vdw_refined0.414
r_symmetry_hbond_refined0.397
r_symmetry_vdw_other0.335
r_chiral_restr0.285
r_xyhbond_nbd_refined0.241
r_nbd_refined0.218
r_nbd_other0.198
r_nbtor_refined0.19
r_nbtor_other0.093
r_bond_refined_d0.013
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.002
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1042
Nucleic Acid Atoms
Solvent Atoms173
Heterogen Atoms14

Software

Software
Software NamePurpose
REFMACrefinement
HKLdata reduction
SCALEPACKdata scaling
MOLREPphasing