☰ Navigation Tabs
Structural basis for Dscam isoform specificity
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 1.5 M AMMONIUM SULPHATE, 0.1 M HEPES PH 7.5
Crystal Properties Matthews coefficient Solvent content 4.6 73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.172 α = 90 b = 99.172 β = 90 c = 163.991 γ = 90
Symmetry Space Group P 42 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2005-02-08 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 20 97.8 0.08 23.4 4.8 271422
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2 91 0.51 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT NONE 1.95 20 56543 3003 98.6 0.171 0.169 0.18 0.205 0.2156 RANDOM 43.77
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.58 0.58 -1.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.855 r_dihedral_angle_4_deg 21.852 r_dihedral_angle_3_deg 16.024 r_dihedral_angle_1_deg 7.451 r_scangle_it 5.959 r_scbond_it 4.469 r_angle_refined_deg 2.656 r_mcangle_it 2.631 r_mcbond_it 2.263 r_angle_other_deg 1.508
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.855 r_dihedral_angle_4_deg 21.852 r_dihedral_angle_3_deg 16.024 r_dihedral_angle_1_deg 7.451 r_scangle_it 5.959 r_scbond_it 4.469 r_angle_refined_deg 2.656 r_mcangle_it 2.631 r_mcbond_it 2.263 r_angle_other_deg 1.508 r_symmetry_hbond_refined 0.42 r_symmetry_vdw_refined 0.334 r_symmetry_vdw_other 0.322 r_nbd_refined 0.294 r_xyhbond_nbd_refined 0.285 r_nbd_other 0.248 r_nbtor_refined 0.189 r_chiral_restr 0.15 r_nbtor_other 0.113 r_bond_refined_d 0.014 r_gen_planes_refined 0.012 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3014 Nucleic Acid Atoms Solvent Atoms 709 Heterogen Atoms 62
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SHELX phasing SHARP phasing DM phasing