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Crystal Structure of a CBS domain pair from the regulatory gamma1 subunit of human AMPK in complex with AMP
Crystallization Crystal Properties Matthews coefficient Solvent content 1.86 33.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.995 α = 90 b = 43.836 β = 118.79 c = 55.734 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU IMAGE PLATE 2005-09-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 48.8 99.8 0.06 3.61 9530
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2 34.94 9026 483 99.8 0.162 0.158 0.23 RANDOM 17.28
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.62 -0.19 0.54 -0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.778 r_dihedral_angle_4_deg 24.72 r_dihedral_angle_3_deg 14.92 r_dihedral_angle_1_deg 5.6 r_angle_refined_deg 1.344 r_angle_other_deg 0.998 r_xyhbond_nbd_refined 0.33 r_symmetry_hbond_refined 0.282 r_nbd_refined 0.219 r_symmetry_vdw_refined 0.213
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.778 r_dihedral_angle_4_deg 24.72 r_dihedral_angle_3_deg 14.92 r_dihedral_angle_1_deg 5.6 r_angle_refined_deg 1.344 r_angle_other_deg 0.998 r_xyhbond_nbd_refined 0.33 r_symmetry_hbond_refined 0.282 r_nbd_refined 0.219 r_symmetry_vdw_refined 0.213 r_nbd_other 0.192 r_symmetry_vdw_other 0.178 r_nbtor_refined 0.17 r_scangle_it 0.148 r_scbond_it 0.117 r_mcangle_it 0.113 r_mcbond_it 0.089 r_nbtor_other 0.083 r_chiral_restr 0.072 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1132 Nucleic Acid Atoms Solvent Atoms 201 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement d*TREK data reduction d*TREK data scaling