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Crystal Structure of a CBS domain pair from the regulatory gamma1 subunit of human AMPK in complex with AMP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 pH 8.00
Crystal Properties Matthews coefficient Solvent content 1.85 33.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.092 α = 90 b = 43.775 β = 119.04 c = 55.786 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU IMAGE PLATE 2005-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 34.89 97.9 0.09 7.9 3.57 9542
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2 34.89 8864 479 98 0.176 0.172 0.247 RANDOM 17.04
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.32 0.19 0.34 0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.647 r_dihedral_angle_4_deg 19.819 r_dihedral_angle_3_deg 14.782 r_dihedral_angle_1_deg 5.588 r_angle_refined_deg 1.316 r_angle_other_deg 0.956 r_xyhbond_nbd_refined 0.276 r_nbd_refined 0.222 r_nbd_other 0.185 r_nbtor_refined 0.169
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.647 r_dihedral_angle_4_deg 19.819 r_dihedral_angle_3_deg 14.782 r_dihedral_angle_1_deg 5.588 r_angle_refined_deg 1.316 r_angle_other_deg 0.956 r_xyhbond_nbd_refined 0.276 r_nbd_refined 0.222 r_nbd_other 0.185 r_nbtor_refined 0.169 r_symmetry_vdw_other 0.168 r_symmetry_hbond_refined 0.167 r_symmetry_vdw_refined 0.154 r_scangle_it 0.138 r_mcangle_it 0.118 r_scbond_it 0.107 r_mcbond_it 0.096 r_nbtor_other 0.082 r_chiral_restr 0.071 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1137 Nucleic Acid Atoms Solvent Atoms 199 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement d*TREK data reduction d*TREK data scaling