2TPK
AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 6.5 | 293 | |||||
2 | DQFCOSY | 6.5 | 293 | |||||
3 | TOCSY | 6.5 | 293 | |||||
4 | NOESY-TOCSY | 6.5 | 293 | |||||
5 | CT-HSQC | 6.5 | 293 | |||||
6 | HCCH-COSY | 6.5 | 293 | |||||
7 | NOESY-HMQC | 6.5 | 293 | |||||
8 | HMQC | 6.5 | 293 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | 500 |
NMR Refinement | ||
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Method | Details | Software |
DISTANCE GEOMETRY-SIMULATED ANNEALING AND ENERGY MINIZATION PROTOCOLS | REFINEMNET DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | |
Conformers Calculated Total Number | 19 |
Conformers Submitted Total Number | 1 |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING NMR SPECTROSCOPY ON 13C,15N-LABELED AND SELECTIVELY DEUTERATED T2 PSEUDOKNOT SAMPLE |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.1 | BRUNGER |
2 | structure solution | Felix | ||
3 | structure solution | XPLOR | 3.1 | BRUNGER |