2SDF
SOLUTION NMR STRUCTURE OF STROMAL CELL-DERIVED FACTOR-1 (SDF-1), 30 STRUCTURES
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | COSY | 4.9 | 303 | |||||
| 2 | NOESY | 4.9 | 303 | |||||
| 3 | TOCSY | 4.9 | 303 | |||||
| 4 | 13C-HSQC | 4.9 | 303 | |||||
| 5 | 13C EDITED HMQC-NOESY | 4.9 | 303 | |||||
| 6 | 15N-HSQC | 4.9 | 303 | |||||
| 7 | 3D 15N-EDITED NOESY-HSQC | 4.9 | 303 | |||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | VARIAN INOVA | 500 |
| 2 | Varian | UNITY | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | STRUCTURES WERE REFINED WITH MULTIPLE ROUNDS OF SIMULATED ANNEALING, WITH THE ADDITION OF NEW NOES AND CORRECTION OF AMBIGUOUS NOES. DETAILS OF THE NUMBER OF RESTRAINTS ETC. CAN BE FOUND IN THE JRNL CITATION ABOVE. | X-PLOR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | ENSEMBLE OF 30 STRUCTURES THAT SATISFIED THE NMR RESTRAINTS WITH NO NOE VIOLATIONS GREATER THAN 0.3 A AND NO DIHEDRAL ANGLE VIOLATIONS GREATER THAN 3 DEGREES. |
| Conformers Calculated Total Number | 30 |
| Conformers Submitted Total Number | 30 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | X-PLOR | 3.1 | BRUNGER |
| 2 | structure solution | X-PLOR | ||
