2RV0

Solution structures of the DNA-binding domain (ZF12) of immune-related zinc-finger protein ZFAT

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 1H-15N NOESY	1.14 mM [U-13C; U-15N] protein-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 1 mM [U-2H] DTT-4, 0.02 % sodium azide-5, 50 uM zinc chloride-6, 90 % H2O-7, 10 % [U-2H] D2O-8	90% H2O/10% D2O	120	7.0	1 atm	296
2	3D 1H-13C NOESY	1.14 mM [U-13C; U-15N] protein-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 1 mM [U-2H] DTT-4, 0.02 % sodium azide-5, 50 uM zinc chloride-6, 90 % H2O-7, 10 % [U-2H] D2O-8	90% H2O/10% D2O	120	7.0	1 atm	296

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	Avance	800

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing		XWINNMR

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	20
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	XWINNMR		Bruker Biospin
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	NMRView		Johnson, One Moon Scientific
4	data analysis	Kujira		N. Kobayashi
5	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
6	structure solution	AMBER		Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
7	refinement	AMBER		Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman