2RU4 | pdb_00002ru4

Designed Armadillo Repeat Protein Self-ASsembled Complex (YIIM2-MAII)

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
2	2D 1H-13C HSQC aliphatic	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
3	3D HNCO	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
4	3D HNCACO	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
5	3D HNCA	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
6	3D HNCACB	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
7	3D CBCA(CO)NH	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
8	3D H(CCO)NH	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
9	3D C(CO)NH	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
10	3D HCCH-TOCSY	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
11	3D 1H-15N NOESY	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
12	3D 1H-13C NOESY aliphatic	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
13	2D 1H-15N HSQC	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
14	2D 1H-13C HSQC aliphatic	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
15	4D HCCH-TOCSY	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
16	2D 1H-15N HSQC	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
17	2D 1H-13C HSQC aliphatic	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
18	3D 1H-15N NOESY	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
19	3D 1H-13C NOESY aliphatic	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
20	3D-13C edited/filtered NOESY	1.0 mM [U-13C; U-15N] YM2-1, 1.5 mM MA-2, 150 mM sodium phosphate-3, 150 mM sodium chloride-4, 2 % glycerol-5, 1 mM TMSP-6, 0.02 % sodium azide-7	90% H2O/10% D2O	150	7.4	ambient	310
21	3D-13C-edited/filtered NOESY	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
22	3D-15N-edited/filtered NOESY	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
23	3D CBCA(CO)NH	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
24	3D HNCACB	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310
25	3D HNCO	0.75 mM [U-13C; U-15N] MA-8, 0.90 mM YM2-9, 150 mM sodium phosphate-10, 150 mM sodium chloride-11, 2 % glycerol-12, 1 mM TMSP-13, 0.02 % sodium azide-14	90% H2O/10% D2O	150	7.4	ambient	310

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	700
2	Bruker	AVANCE	600
3	Varian	Direct Drive	700

NMR Refinement
Method	Details	Software
torsion angle dynamics, simulated annealing	Structure calculation in vacuo, Refinement in explicit TIP3P water	TopSpin

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Additional NMR Experimental Information
Details	CHAINS A AND B ARE NOT COVALENTLY LINKED.

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin	2.1	Bruker Biospin
2	processing	TopSpin	2.1	Bruker Biospin
3	chemical shift assignment	CARA	1.8.4	Keller and Wuthrich
4	peak picking	CcpNMR	2.3.1	CCPN
5	chemical shift assignment	CcpNMR	2.3.1	CCPN
6	data analysis	CcpNMR	2.3.1	CCPN
7	data analysis	UNIO	2.0.2	(UNIO) Herrmann
8	peak picking	UNIO	2.0.2	(UNIO) Herrmann
9	structure solution	UNIO	2.0.2	(UNIO) Herrmann
10	geometry optimization	CYANA	3.96a	Guntert, Mumenthaler and Wuthrich
11	structure solution	CYANA	3.96a	Guntert, Mumenthaler and Wuthrich
12	refinement	X-PLOR NIH	2.32	Schwieters, Kuszewski, Tjandra and Clore
13	data analysis	TALOS-N	4.01	Shen and Bax
14	refinement	CYANA