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Solution structure of the tandem zf-C2H2 domains from the human zinc finger protein ZIC 3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 0.57mM [U-13C; U-15N] zinc finger protein ZIC 3; 20mM [U-2H] TRIS; 100mM sodium chloride; 1mM [U-2H] DTT; 0.02 % sodium azide; 0.05mM ZnCl2; 1mM IDA; 10% [U-2H] D2O; 90% H2O/10% D2O 90% H2O/10% D2O 120 7.0 ambient 298 2 3D 1H-13C NOESY 0.57mM [U-13C; U-15N] zinc finger protein ZIC 3; 20mM [U-2H] TRIS; 100mM sodium chloride; 1mM [U-2H] DTT; 0.02 % sodium azide; 0.05mM ZnCl2; 1mM IDA; 10% [U-2H] D2O; 90% H2O/10% D2O 90% H2O/10% D2O 120 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900
NMR Refinement Method Details Software torsion angle dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 data analysis NMRView Johnson, One Moon Scientific 4 data analysis KUJIRA Kobayashi, N 5 structure solution CYANA Guntert, Mumenthaler and Wuthrich 6 refinement CYANA Guntert, Mumenthaler and Wuthrich