2RMR
Solution structure of mSin3A PAH1 domain
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N NOESY | 0.7-1.0mM [U-15N] Sin3A PAH1 domain, 20mM sodium phosphate, 2mM DTT, 0.2% sodium azide | 90% H2O/10% D2O | .02 | 6 | ambient | 288 | |
2 | 3D 1H-13C NOESY | 0.7-1.0mM [U-13C; U-15N] Sin3A PAH1 domain, 20mM sodium phosphate, 2mM DTT, 0.2% sodium azide | 100% D2O | .02 | 6 | ambient | 288 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges, Read |
2 | processing | Felix | 98.0 | Accelrys Software Inc. |
3 | peak picking | Felix | 98.0 | Accelrys Software Inc. |
4 | data analysis | Felix | 98.0 | Accelrys Software Inc. |
5 | data analysis | ARIA | 1.2 | Linge, O'Donoghue, Nilges |
6 | collection | VNMR | Varian | |
7 | refinement | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges, Read |