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X ray crystal structure of rabbit hemoglobin (oxy form) at 2.0 angstrom resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.36 47.89
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.608 α = 67.23 b = 54.862 β = 66.35 c = 64.021 γ = 60.68
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE MARRESEARCH 2007-03-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU300 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 46.5 92.7 0.075 6.9 2.47 35152
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 91.5 0.3152 1.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 27.3 34297 1796 92.71 0.17386 0.17148 0.1736 0.21911 0.1834 RANDOM 25.309
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.272 r_dihedral_angle_3_deg 16.502 r_dihedral_angle_4_deg 13.683 r_dihedral_angle_1_deg 5.791 r_scangle_it 4.564 r_scbond_it 3.002 r_mcangle_it 1.961 r_angle_refined_deg 1.635 r_mcbond_it 1.165 r_nbtor_refined 0.302
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.272 r_dihedral_angle_3_deg 16.502 r_dihedral_angle_4_deg 13.683 r_dihedral_angle_1_deg 5.791 r_scangle_it 4.564 r_scbond_it 3.002 r_mcangle_it 1.961 r_angle_refined_deg 1.635 r_mcbond_it 1.165 r_nbtor_refined 0.302 r_nbd_refined 0.228 r_metal_ion_refined 0.186 r_symmetry_vdw_refined 0.181 r_symmetry_hbond_refined 0.174 r_xyhbond_nbd_refined 0.152 r_chiral_restr 0.112 r_bond_refined_d 0.019 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4454 Nucleic Acid Atoms Solvent Atoms 199 Heterogen Atoms 180
Software Software Software Name Purpose REFMAC refinement AUTOMAR data reduction PHASES phasing