☰ Navigation Tabs
Structure of Human Arg-Insulin
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1ZNI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.7 293 Sodium Citrate, Acetone, Zinc Sulphate, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.96 37.35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 80.491 α = 90 b = 80.491 β = 90 c = 37.64 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE MARRESEARCH 2006-08-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU300 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 40.26 100 0.12 3.4 5 6141 6141
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 100 0.44 1.2 4.86
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1ZNI 2 40.26 5193 628 95.04 0.2026 0.19668 0.2197 0.24931 0.2359 RANDOM 41.193
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 -0.01 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.529 r_dihedral_angle_3_deg 23.961 r_dihedral_angle_4_deg 22.555 r_dihedral_angle_1_deg 15.512 r_scangle_it 9.557 r_scbond_it 8.844 r_mcangle_it 7.511 r_mcbond_it 6.777 r_angle_refined_deg 2.101 r_chiral_restr 0.699
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.529 r_dihedral_angle_3_deg 23.961 r_dihedral_angle_4_deg 22.555 r_dihedral_angle_1_deg 15.512 r_scangle_it 9.557 r_scbond_it 8.844 r_mcangle_it 7.511 r_mcbond_it 6.777 r_angle_refined_deg 2.101 r_chiral_restr 0.699 r_symmetry_hbond_refined 0.653 r_symmetry_vdw_refined 0.51 r_nbd_refined 0.419 r_xyhbond_nbd_refined 0.386 r_nbtor_refined 0.363 r_bond_refined_d 0.087 r_gen_planes_refined 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 832 Nucleic Acid Atoms Solvent Atoms 57 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement MAR345 data collection AUTOMAR data reduction AMoRE phasing