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CRYSTAL STRUCTURE OF A PUTATIVE OSMOTIC STRESS INDUCED AND DETOXIFICATION RESPONSE PROTEIN (PSYC_0566) FROM PSYCHROBACTER ARCTICUS 273-4 AT 2.15 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.43 293 NANODROP, 0.2M Ammonium sulfate, 30.5% PEG MME 2000, 0.1M Sodium acetate pH 4.43, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.01 38.69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.243 α = 90 b = 57.39 β = 90 c = 103.398 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Flat collimating mirror, toroid focusing mirror 2007-04-01 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.91162, 0.97939, 0.97922 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 36.466 76.3 0.039 0.039 11.4 4 8085
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2.06 58.3 0.222 0.222 3.2 3.9 883
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.95 36.466 8065 393 76.25 0.197 0.197 0.195 0.2009 0.242 0.2525 RANDOM 35.711
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.32 -2.55 3.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.418 r_dihedral_angle_4_deg 12.428 r_dihedral_angle_3_deg 10.358 r_scangle_it 6.269 r_scbond_it 4.331 r_dihedral_angle_1_deg 3.999 r_mcangle_it 2.576 r_mcbond_it 1.647 r_angle_refined_deg 1.631 r_angle_other_deg 1.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.418 r_dihedral_angle_4_deg 12.428 r_dihedral_angle_3_deg 10.358 r_scangle_it 6.269 r_scbond_it 4.331 r_dihedral_angle_1_deg 3.999 r_mcangle_it 2.576 r_mcbond_it 1.647 r_angle_refined_deg 1.631 r_angle_other_deg 1.37 r_mcbond_other 0.39 r_nbd_refined 0.182 r_nbtor_refined 0.144 r_nbd_other 0.142 r_symmetry_vdw_other 0.137 r_xyhbond_nbd_refined 0.103 r_chiral_restr 0.099 r_symmetry_vdw_refined 0.097 r_symmetry_hbond_refined 0.093 r_nbtor_other 0.069 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1030 Nucleic Acid Atoms Solvent Atoms 66 Heterogen Atoms 7
Software Software Software Name Purpose MolProbity model building SHELX phasing REFMAC refinement SCALA data scaling PDB_EXTRACT data extraction MAR345 data collection MOSFLM data reduction CCP4 data scaling autoSHARP phasing