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The structure of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the nucleotide-free form.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2AHO GAMMA SUBUNIT FORM THE AIF2 ALPHA-GAMMA DIMER. PDB ENTRY: 2AHO
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.5 295 natrium malonate dihydrate, glycine,CdCl2., pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K, pH 4.50
Crystal Properties Matthews coefficient Solvent content 4.72 73.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 94.84 α = 90 b = 94.84 β = 90 c = 166.43 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2006-07-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 20 98.7 0.105 11.9 19573
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.9 3 97
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT GAMMA SUBUNIT FORM THE AIF2 ALPHA-GAMMA DIMER. PDB ENTRY: 2AHO 2.9 20 2 19821 19445 970 98.1 0.222 0.222 0.226 0.288 0.2858 RANDOM 58.85
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3213 Nucleic Acid Atoms Solvent Atoms 98 Heterogen Atoms
Software Software Software Name Purpose XDS data scaling MOLREP phasing CNS refinement XDS data reduction