☰ Navigation Tabs
Mechanosensitive Channel of Small Conductance (MscS)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1MXM PDB ENTRY 1MXM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.2 277 PEG 3350, AMMONIUM CHLORIDE, CITRATE, FOSHOLINE-14, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 4.77 74.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 184.274 α = 90 b = 184.274 β = 90 c = 260.485 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.9788, 0.9791, 0.9184, 1.009 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.7 50 100 0.107 20.7 8.1 48452
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 3.7 3.81 100 0.956 2 7.9 3962
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MAD PDB ENTRY 1MXM 3.7 50 48458 2429 99.9 0.293 0.2741 0.321 0.2968 117.936
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -7.188 -7.188 14.376
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 4.948 c_mcangle_it 3.924 c_scbond_it 2.951 c_mcbond_it 2.23 c_angle_deg 1.636 c_bond_d 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13580 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose CNS refinement PDB_EXTRACT data extraction