2O6N

RH4B: designed right-handed coiled coil tetramer with all biological amino acids


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.229810% PEG 4000, 0.1M ammonium sulfate, 0.15M sodium acetate, 10mM ytterbium(II) chloride, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties
Matthews coefficientSolvent content
2.3146.86

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 38.356α = 90
b = 38.356β = 90
c = 49.679γ = 90
Symmetry
Space GroupP 4 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATE2000-02-28MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL9-21.000,1.2398,1.3858,1.3864SSRLBL9-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1130.3699.70.0830.07421.0982071720631228.7
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
111.0599.70.0110.851.264.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.130.3621479779199.40.1160.1150.132RANDOM11.46
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.230.23-0.47
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg23.362
r_dihedral_angle_3_deg12.189
r_sphericity_free11.464
r_scangle_it5.68
r_scbond_it4.618
r_sphericity_bonded4.175
r_dihedral_angle_1_deg4.014
r_mcangle_it2.033
r_mcbond_it1.991
r_rigid_bond_restr1.675
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg23.362
r_dihedral_angle_3_deg12.189
r_sphericity_free11.464
r_scangle_it5.68
r_scbond_it4.618
r_sphericity_bonded4.175
r_dihedral_angle_1_deg4.014
r_mcangle_it2.033
r_mcbond_it1.991
r_rigid_bond_restr1.675
r_angle_refined_deg1.298
r_angle_other_deg0.729
r_mcbond_other0.725
r_nbd_refined0.328
r_symmetry_vdw_refined0.302
r_xyhbond_nbd_refined0.244
r_symmetry_hbond_refined0.243
r_symmetry_vdw_other0.225
r_nbtor_refined0.178
r_nbd_other0.175
r_symmetry_metal_ion_refined0.167
r_chiral_restr0.084
r_nbtor_other0.083
r_metal_ion_refined0.079
r_bond_refined_d0.011
r_gen_planes_refined0.006
r_gen_planes_other0.003
r_bond_other_d0.001
r_dihedral_angle_4_deg
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms274
Nucleic Acid Atoms
Solvent Atoms119
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement
Blu-Icedata collection
MOSFLMdata reduction
SCALAdata scaling
SOLVEphasing