Solution Structure of Putative periplasmic protein: Northest Structural Genomics Target StR106
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | GFT (4,3)D HNNCABCA | 1.1 mM protein, 10mM Tris, 100mM NaCl, 0.02% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 4.5 | 1 atm | 298 | ||
| 2 | GFT (4,3)D CABCA(CO)NHN | 1.1 mM protein, 10mM Tris, 100mM NaCl, 0.02% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 4.5 | 1 atm | 298 | ||
| 3 | GFT (4,3)D HABCAB(CO)NHN | 1.1 mM protein, 10mM Tris, 100mM NaCl, 0.02% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 4.5 | 1 atm | 298 | ||
| 4 | GFT (4,3)D HCCH | 1.1 mM protein, 10mM Tris, 100mM NaCl, 0.02% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 4.5 | 1 atm | 298 | ||
| 5 | SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESY | 1.1 mM protein, 10mM Tris, 100mM NaCl, 0.02% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 4.5 | 1 atm | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 750 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| distance geometry, simulated annealing, molecular dynamics, torsion angle dynamics | DYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | This structure was determined using GFT techniques |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | DYANA | 1.5 | Guntert, P. et al. |
| 2 | processing | NMRPipe | 2.3 | Delaglio, F. et al. |
| 3 | structure solution | CYANA | 2.1 | Guntert, P. et al. |
| 4 | refinement | CNS | 1.1 | Brunger, A.T. et al. |
| 5 | data analysis | XEASY | 1.3 | Bartels, C., Xia, T.H. |
| 6 | data analysis | AutoStructure | 2.0.0 | Huang, Y.J. |
| 7 | data analysis | UBNMR | 1.0 | Shen, Y. |














