2NDA | pdb_00002nda

Solution structure of MapZ extracellular domain second subdomain

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC/HMQC	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
2	3D HN(CA)CO	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
3	3D HNCO	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
4	3D HNCACB	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
5	3D HN(COCA)CB	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
6	3D C(CO)NH	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
7	3D 1H-15N NOESY	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
8	3D 1H-13C NOESY aliphatic	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
9	3D H(CCO)NH	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
10	2D 1H-13C HSQC/HMQC	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
11	2D 1H-13C HSQC/HMQC	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298
12	3D 1H-13C NOESY aromatic	2.5 mM [U-100% 13C; U-100% 15N] MapZ_extra2, 50 mM Tris, 100 mM NaCl, 95% H2O/5% D2O		0.1	7.5	1.0 atm	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	850
2	Bruker	AVANCE	950
3	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
simulated annealing		ARIA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	750
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure calculation	ARIA	2.3.1	W. Rieping, M. Habeck, B. Bardiaux, A. Bernard, T.E. Malliavin and M. Nilges
2	refinement	CNS	1.1	A. Brunger, P. Adams, G. Clore, P. Gros, M. Nilges and R. Read
3	data analysis	CcpNmr Analysis	2.4	CCPN
4	data analysis	TALOS+	1	Y. Shen, F. Delaglio, G. Cornilescu and A. Bax
5	peak picking	Unio10'	2.0.2	T. Herrmann*
6	processing	NMRPipe	any	F. Delaglio, S. Grzesiek,G.W. Vuister, G. Zhu, J. Pfeifer and A. Bax
7	refinement	CNS