2NBM
Solution NMR structure of ligand free sterol carrier protein 2 like 2 from Aedes aegypti
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.7 mM [U-100% 15N] entity-1 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
2 | 2D 1H-13C HSQC | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
3 | 3D CBCA(CO)NH | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
4 | 3D HNCO | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
5 | 3D HNCACB | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
6 | 3D HBHA(CO)NH | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
7 | 3D H(CCO)NH | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
8 | 3D HCCH-TOCSY | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
9 | 3D 1H-13C NOESY aliphatic | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
10 | 3D 1H-15N NOESY | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 700 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DGSA-distance geometry simulated annealing | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | refinement | MOLMOL | Koradi, Billeter and Wuthrich | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | geometry optimization | PSVS | Bhattacharya and Montelione | |
5 | data analysis | Sparky | Goddard | |
6 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
7 | collection | TopSpin | Bruker Biospin | |
8 | data analysis | XEASY | Bartels et al. | |
9 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |