2NAZ | pdb_00002naz

The solution NMR structure of the C-terminal effector domain of BfmR from Acinetobacter baumannii

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273
2	3D HNCO	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273
3	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273
4	3D C(CO)NH	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273
5	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273
6	3D HCCH-TOCSY	1 mM [U-100% 13C] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	100% D2O	0.05	6.5	1 atm	273
7	3D H(CCO)NH	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273
8	3D HBHA(CO)NH	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273
9	3D 1H-13C NOESY aliphatic	1 mM [U-100% 13C] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	100% D2O	0.05	6.5	1 atm	273
10	3D 1H-13C NOESY aromatic	1 mM [U-100% 13C] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	100% D2O	0.05	6.5	1 atm	273
11	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl	90% H2O/10% D2O	0.05	6.5	1 atm	273

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	700
2	Varian	INOVA	600

NMR Refinement
Method	Details	Software
simulated annealing		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	data analysis	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	chemical shift assignment	Sparky		Goddard
3	structure solution	Sparky		Goddard
4	chemical shift assignment	Sparky		Guntert, Mumenthaler and Wuthrich
5	structure solution	Sparky		Guntert, Mumenthaler and Wuthrich
6	chemical shift assignment	Sparky		Goddard
7	structure solution	Sparky		Goddard
8	chemical shift assignment	Sparky		Guntert, Mumenthaler and Wuthrich
9	structure solution	Sparky		Guntert, Mumenthaler and Wuthrich
10	refinement	Amber	12.0	Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.