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Solution structure of translation initiation factor
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCO 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 2 3D HCACO 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 3 3D HNCA 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 4 3D HN(CO)CA 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 5 3D HNCACB 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 6 3D HN(COCA)CB 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 7 3D 1H-15N NOESY 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 8 3D 1H-13C NOESY 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 9 3D HCCH-TOCSY 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308 10 3D 1H-15N TOCSY 0.1mM PMSF-1, 1mM EDTA-2, 50mM sodium chloride-3, 20mM MES-4 90% H2O/10% D2O 50 6 ambient 308
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 900
NMR Refinement Method Details Software simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment NMRView Johnson, One Moon Scientific 3 structure solution CYANA Guntert, Mumenthaler and Wuthrich 4 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read