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The solution structure of Skint-1, a critical determinant of dendritic epidermal gamma-delta T cell selection
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 2 3D HN(CO)CA 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 3 3D HNCA 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 4 3D CBCA(CO)NH 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 5 3D HNCACB 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 6 3D HNCO 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 7 3D HN(CA)CO 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 8 3D HBHA(CO)NH 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 9 3D H(CCO)NH 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 10 3D HCCH-TOCSY 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 11 3D 1H-13C NOESY aromatic 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 12 3D 1H-13C NOESY aromatic 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303 13 3D 1H-15N NOESY 19 mg/mL [U-99% 13C; U-99% 15N] protein, 20 mM MES, 50 mM sodium chloride 90% H2O/10% D2O 50 6.5 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics Sparky
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 peak picking Sparky Goddard 2 chemical shift calculation Sparky Goddard 3 data analysis NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 structure solution CYANA Guntert, Mumenthaler and Wuthrich 5 refinement ARIA Linge, O'Donoghue and Nilges 6 collection VnmrJ Varian 7 refinement CYANA Guntert, Mumenthaler and Wuthrich