2N2Z

NMR spatial structure of nonspecific lipid transfer protein from the dill Anethum graveolens L.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
22D 1H-13C HSQC aliphatic0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
32D 1H-13C HSQC aromatic0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
43D HNCACB0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
53D HNCA0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
63D HNCO0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
73D HN(CO)CA0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
83D HNHA0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
93D 1H-15N NOESY0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
103D HCCH-TOCSY0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
113D 1H-13C NOESY aliphatic0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
123D HCCH-COSY0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
133D HNHB0.5 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 10 mM glycerol95% H2O/5% D2O206.0ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
2data analysisCYANA3.0Guntert, Mumenthaler and Wuthrich
3chemical shift assignmentCARA1.8.4Keller and Wuthrich
4data analysisCARA1.8.4Keller and Wuthrich
5processingqMDD2.5Orekhov and Mayzel
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7refinementCYANAGuntert, Mumenthaler and Wuthrich