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Structure of the C-terminal membrane domain of HCV NS5B protein
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 1.4 mM protein, 1 M [U-2H] SDS 95% H2O/5% D2O ambient 298 2 2D 1H-1H NOESY 1.4 mM protein, 1 M [U-2H] SDS 95% H2O/5% D2O ambient 298 3 2D 1H-15N HSQC 1.4 mM protein, 1 M [U-2H] SDS 95% H2O/5% D2O ambient 298 4 2D 1H-13C HSQC 1.4 mM protein, 1 M [U-2H] SDS 95% H2O/5% D2O ambient 298 5 2D 1H-1H TOCSY 1.4 mM protein, 1 M [U-2H] SDS 95% H2O/5% D2O ambient 298 6 2D 1H-1H NOESY 1.4 mM protein, 1 M [U-2H] SDS 95% H2O/5% D2O ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 1000
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 50 Conformers Submitted Total Number 41 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 chemical shift assignment Sparky Goddard 3 geometry optimization TALOS Cornilescu, Delaglio and Bax 4 structure solution X-PLOR NIH 2.34 Schwieters, Kuszewski, Tjandra and Clore 5 refinement X-PLOR NIH 2.34 Schwieters, Kuszewski, Tjandra and Clore