2N0O

NMR Solution Structure and Model Membrane Interaction Studies of the Peptide Hylin a1 from the Arboreal South American Frog Hypsiboas albopunctatus


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY1 mM Hylin a1, 100 mM [U-2H] SDS, 50 uM [U-99% 2H] D2O, 450 uM H2O, 1 mg/uL TMSP90% H2O/10% D2O7ambient298
22D 1H-1H NOESY1 mM Hylin a1, 100 mM [U-2H] SDS, 50 uM [U-99% 2H] D2O, 450 uM H2O, 1 mg/uL TMSP90% H2O/10% D2O7ambient298
32D 1H-1H COSY1 mM Hylin a1, 100 mM [U-2H] SDS, 50 uM [U-99% 2H] D2O, 450 uM H2O, 1 mg/uL TMSP90% H2O/10% D2O7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR NIH2.28Schwieters, Kuszewski, Tjandra and Clore
2structure solutionX-PLOR NIH2.28Schwieters, Kuszewski, Tjandra and Clore
3processingNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5chemical shift assignmentNMRViewJohnson, One Moon Scientific
6data analysisProcheckNMRLaskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton
7data analysisMOLMOLKoradi, Billeter and Wuthrich