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NMR structure of Neuromedin C in presence of SDS micelles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 5.0 mM Neuromedin C, 10 mM sodium acetate, 1.6 mM DSS, 150 mM [U-99% 2H] SDS 90% H2O/10% D2O 0.01 4.0 ambient atm 288 2 2D 1H-1H NOESY 5.0 mM Neuromedin C, 10 mM sodium acetate, 1.6 mM DSS, 150 mM [U-99% 2H] SDS 90% H2O/10% D2O 0.01 4.0 ambient atm 288 3 2D 1H-15N HSQC 5.0 mM Neuromedin C, 10 mM sodium acetate, 1.6 mM DSS, 150 mM [U-99% 2H] SDS 90% H2O/10% D2O 0.01 4.0 ambient atm 288 4 2D 1H-13C HSQC 5.0 mM Neuromedin C, 10 mM sodium acetate, 1.6 mM DSS, 150 mM [U-99% 2H] SDS 90% H2O/10% D2O 0.01 4.0 ambient atm 288 5 2D 1H-13C HSQC aromatic 5.0 mM Neuromedin C, 10 mM sodium acetate, 1.6 mM DSS, 150 mM [U-99% 2H] SDS 90% H2O/10% D2O 0.01 4.0 ambient atm 288 6 2D 1H-1H NOESY 5.0 mM Neuromedin C, 10 mM sodium acetate, 1.6 mM DSS, 50 mM SDS 90% H2O/10% D2O 0.01 4.0 ambient atm 288
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software distance geometry NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 peak picking XEASY Bartels et al. 3 chemical shift assignment XEASY Bartels et al. 4 structure solution CYANA Guntert, Mumenthaler and Wuthrich 5 geometry optimization CYANA Guntert, Mumenthaler and Wuthrich 6 refinement CYANA Guntert, Mumenthaler and Wuthrich