2MXB

Structure of the transmembrane domain of the mouse erythropoietin receptor


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5-1 mM [U-100% 15N] protein, 20 mM potassium phosphate, 240 mM [U-100% 15N] DPC90% H2O/10% D2O206.5ambient313
22D 1H-15N HSQC0.5-1 mM [U-100% 15N] protein, 20 mM potassium phosphate, 240 mM [U-100% 15N] DPC90% H2O/10% D2O206.5ambient313
33D CBCA(CO)NH0.8 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 240 mM [U-2H] DPC90% H2O/10% D2O206.5ambient313
43D HNCACB0.8 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 240 mM [U-2H] DPC90% H2O/10% D2O206.5ambient313
53D HNCA0.8 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 240 mM [U-2H] DPC90% H2O/10% D2O206.5ambient313
63D HNCO0.8 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 240 mM [U-2H] DPC90% H2O/10% D2O206.5ambient313
73D HBHA(CO)NH0.8 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 240 mM [U-2H] DPC90% H2O/10% D2O206.5ambient313
83D 1H-15N NOESY0.8 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 240 mM [U-2H] DPC90% H2O/10% D2O206.5ambient313
93D HCACO0.5-1 mM [U-100% 15N] protein, 20 mM potassium phosphate, 240 mM [U-100% 15N] DPC90% H2O/10% D2O206.5ambient313
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealingSIMULATED ANNEALING WAS STARTED WITH 3500 AND COOL DOWN TO 100 K WITH 15,000 STEPS. STRUCTURE WAS ENERGY MINIMIZED WITH POWELL ENERGY MINIMIZATION.NMRView
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1peak pickingNMRViewJohnson, One Moon Scientific
2structure solutionNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3collectionTopSpinBruker Biospin
4refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore