2MRU
Structure of truncated EcMazE-DNA complex
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.33-0.4 mM [U-99% 13C; U-99% 15N] entity_1-1, 0-0.4 mM DNA (5'-D(*CP*GP*TP*GP*AP*TP*AP*TP*AP*TP*AP*GP*TP*GP*C)-3')-2, 0-0.4 mM DNA (5'-D(P*GP*CP*AP*CP*TP*AP*TP*AP*TP*AP*TP*CP*AP*CP*G)-3')-3, 50 mM potassium phosphate-4, 50 mM sodium chloride-5 | 90% H2O/10% D2O | 50 | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | VNMRS | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | Haddock runs under CNS | CcpNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 7 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | CcpNMR | CCPN | |
2 | structure solution | HADDOCK | Alexandre Bonvin | |
3 | refinement | HADDOCK | Alexandre Bonvin |