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Solution structure of Escherichia coli Outer membrane protein A C-terminal domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 2 3D HNCACB 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 3 3D CBCA(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 4 3D HNCO 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 5 3D HN(CA)CO 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 6 3D HBHA(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 7 3D H(CCO)NH 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 8 3D C(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 9 3D 1H-15N NOESY 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 90% H2O/10% D2O 0 6 ambient 298 10 3D 1H-13C NOESY 0.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate, 0.03 % sodium azide, 0.5 mM DSS 100% D2O 0 6 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 700
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 30 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CYANA 2.0 Guntert, Mumenthaler and Wuthrich 2 structure solution CYANA 2.0 Guntert, Mumenthaler and Wuthrich 3 structure solution X-PLOR NIH 2.20 Schwieters, Kuszewski, Tjandra and Clore 4 refinement X-PLOR NIH 2.20 Schwieters, Kuszewski, Tjandra and Clore 5 refinement CYANA 2.0 Guntert, Mumenthaler and Wuthrich