2MLX

NMR structure of E. coli Trigger Factor in complex with unfolded PhoA220-310


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
22D 1H-13C HSQC0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
33D 1H-13C NOESY0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
43D 1H-15N NOESY0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
53D HNCACB0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
63D 1H-13C HMQC-NOESY0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
72D 1H-13C HMQC0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
83D HCCH-TOCSY0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
93D H(CCO)NH0.5 mM [U-100% 13C; U-100% 15N] Alkaline phosphatase, 0.5 mM [U-100% 13C; U-100% 15N] Trigger Factor, 100 mM potassium chloride, 3 mM BME, 20 mM potassium phosphate90% H2O/10% D2O1007ambient295
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA800
3BrukerAVANCE700
4BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2chemical shift assignmentSparky3.113Goddard
3refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
4chemical shift assignmentOlivia1.16Olivia, Yokochi Masashi
5structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
6collectionTopSpin3.1Bruker Biospin
7collectionVnmrJVarian
8structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
9geometry optimizationTALOSNShen and Bax
10validationPSVS1.5Bhattacharya and Montelione